Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.85■□□□□ 0.29
LCN1P31025 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.85■□□□□ 0.29
LCN1P31025 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.85■□□□□ 0.29
LCN1P31025 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCN1P31025 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LCN1P31025 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LCN1P31025 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.84■□□□□ 0.29
LCN1P31025 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
LCN1P31025 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
LCN1P31025 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 RASA4DP-201ENST00000460726 1199 ntBASIC16.84■□□□□ 0.29
LCN1P31025 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
LCN1P31025 AL441883.1-201ENST00000566170 1045 ntBASIC16.84■□□□□ 0.29
LCN1P31025 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.84■□□□□ 0.29
LCN1P31025 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.84■□□□□ 0.29
LCN1P31025 AC139887.4-201ENST00000607877 719 ntBASIC16.84■□□□□ 0.29
LCN1P31025 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 AC011558.1-201ENST00000623459 338 ntBASIC16.84■□□□□ 0.29
LCN1P31025 AL157888.1-201ENST00000631930 593 ntBASIC16.84■□□□□ 0.29
LCN1P31025 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LCN1P31025 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.84■□□□□ 0.29
LCN1P31025 KRT89P-201ENST00000620027 1478 ntBASIC16.84■□□□□ 0.29
LCN1P31025 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 AC135050.7-201ENST00000624508 2218 ntBASIC16.84■□□□□ 0.29
LCN1P31025 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCN1P31025 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.84■□□□□ 0.29
LCN1P31025 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LCN1P31025 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
LCN1P31025 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.83■□□□□ 0.28
LCN1P31025 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LCN1P31025 TSPY5P-201ENST00000426936 936 ntBASIC16.83■□□□□ 0.28
LCN1P31025 AC117947.1-201ENST00000427448 529 ntBASIC16.83■□□□□ 0.28
LCN1P31025 NOC2LP1-202ENST00000452600 2235 ntBASIC16.83■□□□□ 0.28
LCN1P31025 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.83■□□□□ 0.28
LCN1P31025 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LCN1P31025 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LCN1P31025 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.83■□□□□ 0.28
LCN1P31025 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
LCN1P31025 AC093677.2-201ENST00000600169 1863 ntBASIC16.83■□□□□ 0.28
LCN1P31025 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.83■□□□□ 0.28
LCN1P31025 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.83■□□□□ 0.28
LCN1P31025 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
LCN1P31025 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCN1P31025 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LCN1P31025 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 ABALON-201ENST00000629058 1903 ntBASIC16.82■□□□□ 0.28
LCN1P31025 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LCN1P31025 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 AL133373.2-201ENST00000623187 2828 ntBASIC16.82■□□□□ 0.28
LCN1P31025 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.82■□□□□ 0.28
LCN1P31025 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.82■□□□□ 0.28
LCN1P31025 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.82■□□□□ 0.28
LCN1P31025 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.82■□□□□ 0.28
LCN1P31025 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.82■□□□□ 0.28
LCN1P31025 LINC01238-205ENST00000567549 1107 ntBASIC16.82■□□□□ 0.28
LCN1P31025 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LCN1P31025 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.82■□□□□ 0.28
LCN1P31025 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCN1P31025 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms