Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 YBX1P2-201ENST00000489612 999 ntBASIC18.56■□□□□ 0.56
PTPN3P26045 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN3P26045 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN3P26045 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN3P26045 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PTPN3P26045 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN3P26045 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN3P26045 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN3P26045 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTPN3P26045 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 SPDYE15P-201ENST00000424157 909 ntBASIC18.55■□□□□ 0.56
PTPN3P26045 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTPN3P26045 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN3P26045 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 AC079602.3-201ENST00000623931 403 ntBASIC18.55■□□□□ 0.56
PTPN3P26045 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PTPN3P26045 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PTPN3P26045 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN3P26045 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN3P26045 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN3P26045 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN3P26045 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN3P26045 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN3P26045 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PTPN3P26045 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN3P26045 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PTPN3P26045 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN3P26045 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN3P26045 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN3P26045 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN3P26045 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN3P26045 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN3P26045 AC132938.6-201ENST00000623828 1655 ntBASIC18.54■□□□□ 0.56
PTPN3P26045 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN3P26045 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN3P26045 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN3P26045 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN3P26045 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.53■□□□□ 0.56
PTPN3P26045 SLC25A6P5-201ENST00000435663 894 ntBASIC18.53■□□□□ 0.56
PTPN3P26045 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN3P26045 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN3P26045 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PTPN3P26045 AC067852.2-201ENST00000590513 2313 ntBASIC18.53■□□□□ 0.56
PTPN3P26045 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.53■□□□□ 0.56
PTPN3P26045 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 AC006011.2-201ENST00000621313 1158 ntBASIC18.53■□□□□ 0.56
PTPN3P26045 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN3P26045 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN3P26045 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms