Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LMO1P25800 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LMO1P25800 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO1P25800 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
LMO1P25800 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO1P25800 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO1P25800 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO1P25800 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LMO1P25800 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.27■□□□□ 0.04
LMO1P25800 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 LINC01023-201ENST00000606054 436 ntBASIC15.27■□□□□ 0.04
LMO1P25800 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LMO1P25800 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO1P25800 AC141257.4-201ENST00000634557 245 ntBASIC15.27■□□□□ 0.04
LMO1P25800 AC136944.6-201ENST00000634818 245 ntBASIC15.27■□□□□ 0.04
LMO1P25800 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.27■□□□□ 0.03
LMO1P25800 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.27■□□□□ 0.03
LMO1P25800 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.27■□□□□ 0.03
LMO1P25800 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO1P25800 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LMO1P25800 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 MIR1224-201ENST00000408193 85 ntBASIC15.26■□□□□ 0.03
LMO1P25800 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.26■□□□□ 0.03
LMO1P25800 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 AC008687.5-201ENST00000593746 558 ntBASIC15.26■□□□□ 0.03
LMO1P25800 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.26■□□□□ 0.03
LMO1P25800 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 AC099343.3-201ENST00000605834 2503 ntBASIC15.26■□□□□ 0.03
LMO1P25800 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO1P25800 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
LMO1P25800 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO1P25800 PCDHA12-202ENST00000613593 2588 ntBASIC15.26■□□□□ 0.03
LMO1P25800 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.26■□□□□ 0.03
LMO1P25800 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms