Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCL1P22362 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 HMGA1P5-201ENST00000412453 271 ntBASIC15.66■□□□□ 0.1
CCL1P22362 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL1P22362 NAPSB-206ENST00000562112 1266 ntBASIC15.66■□□□□ 0.1
CCL1P22362 AC024243.1-201ENST00000609234 778 ntBASIC15.66■□□□□ 0.1
CCL1P22362 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL1P22362 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCL1P22362 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCL1P22362 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCL1P22362 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCL1P22362 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL1P22362 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCL1P22362 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCL1P22362 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.65■□□□□ 0.1
CCL1P22362 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL1P22362 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CCL1P22362 AC092865.7-201ENST00000641832 219 ntBASIC15.65■□□□□ 0.1
CCL1P22362 AC138932.1-201ENST00000534164 6830 ntBASIC15.65■□□□□ 0.1
CCL1P22362 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL1P22362 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL1P22362 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL1P22362 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL1P22362 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL1P22362 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCL1P22362 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 PVRIG2P-201ENST00000435460 978 ntBASIC15.64■□□□□ 0.09
CCL1P22362 TSPY15P-201ENST00000457163 923 ntBASIC15.64■□□□□ 0.09
CCL1P22362 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 LINC00167-201ENST00000530583 1419 ntBASIC15.64■□□□□ 0.09
CCL1P22362 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
CCL1P22362 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.64■□□□□ 0.09
CCL1P22362 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL1P22362 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL1P22362 SIRPAP1-201ENST00000448467 1770 ntBASIC15.64■□□□□ 0.09
CCL1P22362 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL1P22362 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL1P22362 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCL1P22362 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms