Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.18■■□□□ 1.14
KCNA3P22001 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 SIGLEC16-201ENST00000599858 1437 ntBASIC22.18■■□□□ 1.14
KCNA3P22001 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.18■■□□□ 1.14
KCNA3P22001 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.18■■□□□ 1.14
KCNA3P22001 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.18■■□□□ 1.14
KCNA3P22001 VN2R19P-201ENST00000442399 1052 ntBASIC22.18■■□□□ 1.14
KCNA3P22001 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.18■■□□□ 1.14
KCNA3P22001 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.18■■□□□ 1.14
KCNA3P22001 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.18■■□□□ 1.14
KCNA3P22001 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.18■■□□□ 1.14
KCNA3P22001 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.18■■□□□ 1.14
KCNA3P22001 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.18■■□□□ 1.14
KCNA3P22001 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KCNA3P22001 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNA3P22001 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KCNA3P22001 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNA3P22001 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.17■■□□□ 1.14
KCNA3P22001 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNA3P22001 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.17■■□□□ 1.14
KCNA3P22001 HLA-J-203ENST00000494367 1087 ntBASIC22.17■■□□□ 1.14
KCNA3P22001 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNA3P22001 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.17■■□□□ 1.14
KCNA3P22001 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNA3P22001 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.17■■□□□ 1.14
KCNA3P22001 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
KCNA3P22001 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.16■■□□□ 1.14
KCNA3P22001 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
KCNA3P22001 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNA3P22001 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.16■■□□□ 1.14
KCNA3P22001 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.16■■□□□ 1.14
KCNA3P22001 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.16■■□□□ 1.14
KCNA3P22001 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNA3P22001 AC004706.3-202ENST00000621574 984 ntBASIC22.16■■□□□ 1.14
KCNA3P22001 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNA3P22001 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNA3P22001 MYLKP1-201ENST00000509077 1580 ntBASIC22.16■■□□□ 1.14
KCNA3P22001 AC006504.4-201ENST00000592118 1568 ntBASIC22.16■■□□□ 1.14
KCNA3P22001 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNA3P22001 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.16■■□□□ 1.14
KCNA3P22001 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
KCNA3P22001 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.15■■□□□ 1.14
KCNA3P22001 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.15■■□□□ 1.14
KCNA3P22001 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.15■■□□□ 1.14
KCNA3P22001 AC108073.2-201ENST00000464002 357 ntBASIC22.15■■□□□ 1.14
KCNA3P22001 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
KCNA3P22001 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.15■■□□□ 1.14
KCNA3P22001 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.15■■□□□ 1.14
KCNA3P22001 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.15■■□□□ 1.14
KCNA3P22001 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.15■■□□□ 1.14
KCNA3P22001 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
KCNA3P22001 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.15■■□□□ 1.14
KCNA3P22001 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.15■■□□□ 1.14
KCNA3P22001 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
KCNA3P22001 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNA3P22001 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KCNA3P22001 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
KCNA3P22001 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.14■■□□□ 1.14
KCNA3P22001 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KCNA3P22001 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KCNA3P22001 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.14■■□□□ 1.13
KCNA3P22001 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 SPDYE21P-201ENST00000413323 827 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms