Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 AC012313.1-201ENST00000593393 3059 ntBASIC16.32■□□□□ 0.2
PPP3CBP16298 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PPP3CBP16298 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
PPP3CBP16298 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 RCC2P3-201ENST00000418112 1537 ntBASIC16.32■□□□□ 0.2
PPP3CBP16298 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.32■□□□□ 0.2
PPP3CBP16298 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.32■□□□□ 0.2
PPP3CBP16298 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.32■□□□□ 0.2
PPP3CBP16298 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.32■□□□□ 0.2
PPP3CBP16298 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP3CBP16298 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PPP3CBP16298 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.32■□□□□ 0.2
PPP3CBP16298 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PPP3CBP16298 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PPP3CBP16298 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP3CBP16298 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PPP3CBP16298 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 HOXB1-202ENST00000577092 1414 ntBASIC16.31■□□□□ 0.2
PPP3CBP16298 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PPP3CBP16298 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP3CBP16298 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP3CBP16298 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP3CBP16298 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP3CBP16298 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP3CBP16298 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP3CBP16298 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP3CBP16298 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 FP475955.4-201ENST00000623131 1990 ntBASIC16.31■□□□□ 0.2
PPP3CBP16298 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.31■□□□□ 0.2
PPP3CBP16298 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PPP3CBP16298 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP3CBP16298 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
PPP3CBP16298 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PPP3CBP16298 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.3■□□□□ 0.2
PPP3CBP16298 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PPP3CBP16298 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms