Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFRAP16234 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFRAP16234 AC018470.1-201ENST00000624790 3129 ntBASIC19.11■□□□□ 0.65
PDGFRAP16234 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PDGFRAP16234 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFRAP16234 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PDGFRAP16234 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFRAP16234 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDGFRAP16234 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFRAP16234 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.1■□□□□ 0.65
PDGFRAP16234 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDGFRAP16234 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFRAP16234 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFRAP16234 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 AC090340.1-201ENST00000620778 4980 ntBASIC19.1■□□□□ 0.65
PDGFRAP16234 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFRAP16234 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFRAP16234 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFRAP16234 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PDGFRAP16234 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFRAP16234 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.09■□□□□ 0.65
PDGFRAP16234 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PDGFRAP16234 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 SPDYE15P-201ENST00000424157 909 ntBASIC19.09■□□□□ 0.65
PDGFRAP16234 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFRAP16234 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 AC079602.3-201ENST00000623931 403 ntBASIC19.09■□□□□ 0.65
PDGFRAP16234 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDGFRAP16234 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.09■□□□□ 0.65
PDGFRAP16234 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFRAP16234 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 NOC2LP1-202ENST00000452600 2235 ntBASIC19.09■□□□□ 0.65
PDGFRAP16234 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFRAP16234 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.08■□□□□ 0.65
PDGFRAP16234 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFRAP16234 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.08■□□□□ 0.64
PDGFRAP16234 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PDGFRAP16234 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
PDGFRAP16234 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDGFRAP16234 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PDGFRAP16234 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFRAP16234 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFRAP16234 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 AL031133.1-201ENST00000406807 723 ntBASIC19.07■□□□□ 0.64
PDGFRAP16234 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PDGFRAP16234 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFRAP16234 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 AL391807.1-203ENST00000604392 2365 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms