Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
DEFA4P12838 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
DEFA4P12838 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.82□□□□□ -0.04
DEFA4P12838 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
DEFA4P12838 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DEFA4P12838 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.82□□□□□ -0.04
DEFA4P12838 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.81□□□□□ -0.04
DEFA4P12838 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
DEFA4P12838 RPS2P55-201ENST00000397318 883 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 AC098590.1-201ENST00000468126 897 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 AC011506.1-201ENST00000474329 610 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 AC107956.1-201ENST00000494359 873 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.81□□□□□ -0.04
DEFA4P12838 SLC25A1P4-201ENST00000567977 778 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 MYC-208ENST00000641036 567 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 LINC00896-202ENST00000609602 2128 ntBASIC14.81□□□□□ -0.04
DEFA4P12838 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
DEFA4P12838 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.81□□□□□ -0.04
DEFA4P12838 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.81□□□□□ -0.04
DEFA4P12838 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DEFA4P12838 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
DEFA4P12838 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
DEFA4P12838 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.8□□□□□ -0.04
DEFA4P12838 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms