Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 AC104692.2-201ENST00000603054 253 ntBASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MYLKP1-201ENST00000509077 1580 ntBASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB40ALP0C0E4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 LETM1P2-201ENST00000597330 2178 ntBASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 MINOS1P3-201ENST00000457048 203 ntBASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 AL031008.1-201ENST00000619963 541 ntBASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40ALP0C0E4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms