Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM215A-202ENST00000632077 792 ntBASIC18.33■□□□□ 0.52
RETP07949 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
RETP07949 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RETP07949 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RETP07949 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RETP07949 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RETP07949 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RETP07949 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.32■□□□□ 0.52
RETP07949 UPF3AP3-201ENST00000420996 769 ntBASIC18.32■□□□□ 0.52
RETP07949 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.32■□□□□ 0.52
RETP07949 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.32■□□□□ 0.52
RETP07949 AC027796.2-201ENST00000575326 344 ntBASIC18.32■□□□□ 0.52
RETP07949 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.32■□□□□ 0.52
RETP07949 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 AL161938.1-201ENST00000569833 2180 ntBASIC18.32■□□□□ 0.52
RETP07949 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.32■□□□□ 0.52
RETP07949 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RETP07949 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RETP07949 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.32■□□□□ 0.52
RETP07949 AL353692.3-201ENST00000407031 1396 ntBASIC18.31■□□□□ 0.52
RETP07949 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RETP07949 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 SCARNA2-201ENST00000458748 420 ntBASIC18.31■□□□□ 0.52
RETP07949 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RETP07949 BNIP3P18-201ENST00000593976 575 ntBASIC18.31■□□□□ 0.52
RETP07949 AP001160.2-201ENST00000596071 487 ntBASIC18.31■□□□□ 0.52
RETP07949 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.31■□□□□ 0.52
RETP07949 AC027601.4-201ENST00000611259 610 ntBASIC18.31■□□□□ 0.52
RETP07949 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.31■□□□□ 0.52
RETP07949 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 AC083906.6-201ENST00000641366 219 ntBASIC18.31■□□□□ 0.52
RETP07949 AC079781.4-201ENST00000641908 219 ntBASIC18.31■□□□□ 0.52
RETP07949 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RETP07949 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RETP07949 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RETP07949 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.31■□□□□ 0.52
RETP07949 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RETP07949 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
RETP07949 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.3■□□□□ 0.52
RETP07949 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.3■□□□□ 0.52
RETP07949 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RETP07949 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.3■□□□□ 0.52
RETP07949 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.3■□□□□ 0.52
RETP07949 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RETP07949 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 AC132008.2-207ENST00000454517 770 ntBASIC18.3■□□□□ 0.52
RETP07949 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 AC114341.1-201ENST00000618070 349 ntBASIC18.3■□□□□ 0.52
RETP07949 AC116407.3-201ENST00000623905 1129 ntBASIC18.3■□□□□ 0.52
RETP07949 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.3■□□□□ 0.52
RETP07949 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RETP07949 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms