Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PDGFAP04085 IGHGP-201ENST00000390555 1178 ntBASIC17■□□□□ 0.31
PDGFAP04085 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PDGFAP04085 FICD-205ENST00000552758 603 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17■□□□□ 0.31
PDGFAP04085 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 AC020763.4-201ENST00000623414 4170 ntBASIC17■□□□□ 0.31
PDGFAP04085 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17■□□□□ 0.31
PDGFAP04085 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17■□□□□ 0.31
PDGFAP04085 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PDGFAP04085 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.99■□□□□ 0.31
PDGFAP04085 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDGFAP04085 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 RN7SL606P-201ENST00000472779 293 ntBASIC16.99■□□□□ 0.31
PDGFAP04085 AF238378.1-201ENST00000526806 358 ntBASIC16.99■□□□□ 0.31
PDGFAP04085 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 BX640515.1-201ENST00000617215 977 ntBASIC16.99■□□□□ 0.31
PDGFAP04085 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.99■□□□□ 0.31
PDGFAP04085 AC124864.1-201ENST00000623408 392 ntBASIC16.99■□□□□ 0.31
PDGFAP04085 TP73-AS1-207ENST00000624167 988 ntBASIC16.99■□□□□ 0.31
PDGFAP04085 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.99■□□□□ 0.31
PDGFAP04085 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDGFAP04085 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.99■□□□□ 0.31
PDGFAP04085 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFAP04085 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFAP04085 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 NSUN5P1-202ENST00000421140 1535 ntBASIC16.98■□□□□ 0.31
PDGFAP04085 NSUN5P2-203ENST00000457352 1529 ntBASIC16.98■□□□□ 0.31
PDGFAP04085 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFAP04085 AL590627.1-203ENST00000421194 1026 ntBASIC16.98■□□□□ 0.31
PDGFAP04085 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.98■□□□□ 0.31
PDGFAP04085 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFAP04085 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDGFAP04085 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PDGFAP04085 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDGFAP04085 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFAP04085 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PDGFAP04085 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 AC018470.1-201ENST00000624790 3129 ntBASIC16.97■□□□□ 0.31
PDGFAP04085 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
PDGFAP04085 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms