Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV3P03979 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV3P03979 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV3P03979 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TRGV3P03979 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV3P03979 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRGV3P03979 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV3P03979 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRGV3P03979 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV3P03979 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.33□□□□□ -0.11
TRGV3P03979 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRGV3P03979 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRGV3P03979 FAM8A6P-201ENST00000407496 1135 ntBASIC14.33□□□□□ -0.12
TRGV3P03979 AC063952.2-201ENST00000498792 1227 ntBASIC14.33□□□□□ -0.12
TRGV3P03979 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.33□□□□□ -0.12
TRGV3P03979 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 AC104581.1-202ENST00000635932 2618 ntBASIC14.33□□□□□ -0.12
TRGV3P03979 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV3P03979 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRGV3P03979 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRGV3P03979 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRGV3P03979 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV3P03979 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.32□□□□□ -0.12
TRGV3P03979 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 SPDYE15P-201ENST00000424157 909 ntBASIC14.32□□□□□ -0.12
TRGV3P03979 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV3P03979 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRGV3P03979 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV3P03979 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.31□□□□□ -0.12
TRGV3P03979 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.31□□□□□ -0.12
TRGV3P03979 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 GMCL1P1-201ENST00000463439 1581 ntBASIC14.31□□□□□ -0.12
TRGV3P03979 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRGV3P03979 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 SDHAP2-201ENST00000455183 2001 ntBASIC14.31□□□□□ -0.12
TRGV3P03979 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
TRGV3P03979 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms