Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 AL162741.1-201ENST00000565563 1558 ntBASIC14.05□□□□□ -0.16
TRBV12-3P01733 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 HCG11-201ENST00000411553 5696 ntBASIC14.05□□□□□ -0.16
TRBV12-3P01733 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 MIR662-201ENST00000384847 95 ntBASIC14.05□□□□□ -0.16
TRBV12-3P01733 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 AL645929.1-201ENST00000420084 975 ntBASIC14.05□□□□□ -0.16
TRBV12-3P01733 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.05□□□□□ -0.16
TRBV12-3P01733 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRBV12-3P01733 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV12-3P01733 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 AL354751.1-201ENST00000412768 1863 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 KRT18P48-201ENST00000434763 852 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 FAM86EP-206ENST00000510506 987 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 RNF126P1-202ENST00000569893 925 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 AL121956.5-201ENST00000625261 221 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 AC005332.1-201ENST00000577698 1310 ntBASIC14.04□□□□□ -0.16
TRBV12-3P01733 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms