Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
ZBED1O96006 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZBED1O96006 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.22■□□□□ 0.67
ZBED1O96006 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ZBED1O96006 AC024563.2-201ENST00000603282 481 ntBASIC19.22■□□□□ 0.67
ZBED1O96006 AC091076.1-201ENST00000610741 619 ntBASIC19.22■□□□□ 0.67
ZBED1O96006 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ZBED1O96006 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZBED1O96006 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.22■□□□□ 0.67
ZBED1O96006 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
ZBED1O96006 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.22■□□□□ 0.67
ZBED1O96006 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
ZBED1O96006 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZBED1O96006 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.21■□□□□ 0.67
ZBED1O96006 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 BICD1-207ENST00000551848 1962 ntBASIC19.21■□□□□ 0.67
ZBED1O96006 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.21■□□□□ 0.67
ZBED1O96006 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.21■□□□□ 0.67
ZBED1O96006 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
ZBED1O96006 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.21■□□□□ 0.67
ZBED1O96006 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.21■□□□□ 0.67
ZBED1O96006 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.21■□□□□ 0.67
ZBED1O96006 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.21■□□□□ 0.67
ZBED1O96006 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.21■□□□□ 0.67
ZBED1O96006 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.21■□□□□ 0.67
ZBED1O96006 AC116407.4-201ENST00000623319 1061 ntBASIC19.21■□□□□ 0.67
ZBED1O96006 AP000550.4-202ENST00000639755 178 ntBASIC19.21■□□□□ 0.67
ZBED1O96006 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.21■□□□□ 0.67
ZBED1O96006 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
ZBED1O96006 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.21■□□□□ 0.67
ZBED1O96006 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZBED1O96006 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
ZBED1O96006 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 IER3-202ENST00000376377 1350 ntBASIC19.2■□□□□ 0.66
ZBED1O96006 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.2■□□□□ 0.66
ZBED1O96006 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 AL024508.2-201ENST00000607749 1894 ntBASIC19.2■□□□□ 0.66
ZBED1O96006 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.2■□□□□ 0.66
ZBED1O96006 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.2■□□□□ 0.66
ZBED1O96006 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
ZBED1O96006 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 KRT18P48-201ENST00000434763 852 ntBASIC19.2■□□□□ 0.66
ZBED1O96006 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZBED1O96006 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.2■□□□□ 0.66
ZBED1O96006 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.2■□□□□ 0.66
ZBED1O96006 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms