Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF1O95521 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF1O95521 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 KRT89P-201ENST00000620027 1478 ntBASIC18.09■□□□□ 0.49
PRAMEF1O95521 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 KRT18P48-201ENST00000434763 852 ntBASIC18.09■□□□□ 0.49
PRAMEF1O95521 SPDYE13P-201ENST00000445314 798 ntBASIC18.09■□□□□ 0.49
PRAMEF1O95521 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 ZNF444P1-201ENST00000559497 298 ntBASIC18.09■□□□□ 0.49
PRAMEF1O95521 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF1O95521 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF1O95521 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
PRAMEF1O95521 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PRAMEF1O95521 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF1O95521 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF1O95521 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF1O95521 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.08■□□□□ 0.49
PRAMEF1O95521 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF1O95521 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 MIR662-201ENST00000384847 95 ntBASIC18.08■□□□□ 0.48
PRAMEF1O95521 AL031133.1-201ENST00000406807 723 ntBASIC18.08■□□□□ 0.48
PRAMEF1O95521 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 AC087388.1-201ENST00000571370 1112 ntBASIC18.08■□□□□ 0.48
PRAMEF1O95521 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 AC007613.1-201ENST00000572811 2597 ntBASIC18.08■□□□□ 0.48
PRAMEF1O95521 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF1O95521 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF1O95521 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF1O95521 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF1O95521 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF1O95521 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF1O95521 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF1O95521 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF1O95521 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF1O95521 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF1O95521 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF1O95521 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF1O95521 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms