Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL3O95164 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL3O95164 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL3O95164 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL3O95164 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL3O95164 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.33■□□□□ 0.21
UBL3O95164 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL3O95164 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.33■□□□□ 0.2
UBL3O95164 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.33■□□□□ 0.2
UBL3O95164 ATP5G1P1-201ENST00000448724 379 ntBASIC16.33■□□□□ 0.2
UBL3O95164 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.33■□□□□ 0.2
UBL3O95164 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL3O95164 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.33■□□□□ 0.2
UBL3O95164 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.33■□□□□ 0.2
UBL3O95164 CR769767.2-201ENST00000622735 460 ntBASIC16.33■□□□□ 0.2
UBL3O95164 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
UBL3O95164 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 MTMR9LP-203ENST00000426597 1545 ntBASIC16.33■□□□□ 0.2
UBL3O95164 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBL3O95164 AC036111.1-201ENST00000533973 1582 ntBASIC16.33■□□□□ 0.2
UBL3O95164 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL3O95164 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL3O95164 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
UBL3O95164 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBL3O95164 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL3O95164 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBL3O95164 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL3O95164 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBL3O95164 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 MIR564-202ENST00000385049 94 ntBASIC16.32■□□□□ 0.2
UBL3O95164 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL3O95164 AP000523.1-201ENST00000398242 1049 ntBASIC16.32■□□□□ 0.2
UBL3O95164 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL3O95164 AC113347.1-201ENST00000413321 391 ntBASIC16.32■□□□□ 0.2
UBL3O95164 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
UBL3O95164 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL3O95164 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL3O95164 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.32■□□□□ 0.2
UBL3O95164 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL3O95164 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL3O95164 MYC-208ENST00000641036 567 ntBASIC16.32■□□□□ 0.2
UBL3O95164 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBL3O95164 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
UBL3O95164 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL3O95164 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.31■□□□□ 0.2
UBL3O95164 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBL3O95164 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 AC034236.2-201ENST00000606662 1610 ntBASIC16.31■□□□□ 0.2
UBL3O95164 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 KRT8P45-201ENST00000414328 1447 ntBASIC16.31■□□□□ 0.2
UBL3O95164 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBL3O95164 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL3O95164 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBL3O95164 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms