Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT33AO76009 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT33AO76009 KRT8P45-201ENST00000414328 1447 ntBASIC16.53■□□□□ 0.24
KRT33AO76009 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT33AO76009 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT33AO76009 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
KRT33AO76009 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT33AO76009 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT33AO76009 AP000523.1-201ENST00000398242 1049 ntBASIC16.52■□□□□ 0.24
KRT33AO76009 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT33AO76009 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT33AO76009 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT33AO76009 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT33AO76009 CR769767.2-201ENST00000622735 460 ntBASIC16.52■□□□□ 0.24
KRT33AO76009 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
KRT33AO76009 ABALON-201ENST00000629058 1903 ntBASIC16.52■□□□□ 0.23
KRT33AO76009 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT33AO76009 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT33AO76009 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT33AO76009 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
KRT33AO76009 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.52■□□□□ 0.23
KRT33AO76009 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT33AO76009 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT33AO76009 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT33AO76009 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT33AO76009 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
KRT33AO76009 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT33AO76009 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT33AO76009 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT33AO76009 AC140113.3-201ENST00000605663 199 ntBASIC16.51■□□□□ 0.23
KRT33AO76009 AC012306.2-201ENST00000609350 630 ntBASIC16.51■□□□□ 0.23
KRT33AO76009 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT33AO76009 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT33AO76009 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT33AO76009 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KRT33AO76009 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 AL357033.4-201ENST00000617703 1807 ntBASIC16.5■□□□□ 0.23
KRT33AO76009 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT33AO76009 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 AC005521.1-201ENST00000393351 872 ntBASIC16.5■□□□□ 0.23
KRT33AO76009 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT33AO76009 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KRT33AO76009 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KRT33AO76009 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT33AO76009 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms