Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CAPN9O14815 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CAPN9O14815 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN9O14815 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 PVRIG2P-201ENST00000435460 978 ntBASIC19.21■□□□□ 0.67
CAPN9O14815 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 SDHAP2-201ENST00000455183 2001 ntBASIC19.21■□□□□ 0.67
CAPN9O14815 AL671277.2-201ENST00000458060 996 ntBASIC19.21■□□□□ 0.67
CAPN9O14815 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 AC087388.1-201ENST00000571370 1112 ntBASIC19.21■□□□□ 0.67
CAPN9O14815 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN9O14815 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN9O14815 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CAPN9O14815 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN9O14815 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN9O14815 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CAPN9O14815 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.2■□□□□ 0.66
CAPN9O14815 LINC01311-201ENST00000565162 1445 ntBASIC19.2■□□□□ 0.66
CAPN9O14815 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 AC092597.1-201ENST00000487352 616 ntBASIC19.2■□□□□ 0.66
CAPN9O14815 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CAPN9O14815 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CAPN9O14815 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 AL136038.4-201ENST00000603606 1261 ntBASIC19.2■□□□□ 0.66
CAPN9O14815 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.2■□□□□ 0.66
CAPN9O14815 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN9O14815 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CAPN9O14815 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN9O14815 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN9O14815 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN9O14815 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CAPN9O14815 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CAPN9O14815 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.19■□□□□ 0.66
CAPN9O14815 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 AC104581.1-202ENST00000635932 2618 ntBASIC19.19■□□□□ 0.66
CAPN9O14815 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CAPN9O14815 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.19■□□□□ 0.66
CAPN9O14815 AC079602.3-201ENST00000623931 403 ntBASIC19.19■□□□□ 0.66
CAPN9O14815 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CAPN9O14815 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CAPN9O14815 AC090164.3-201ENST00000610780 2143 ntBASIC19.19■□□□□ 0.66
CAPN9O14815 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPN9O14815 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN9O14815 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CAPN9O14815 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 AL391807.1-203ENST00000604392 2365 ntBASIC19.19■□□□□ 0.66
CAPN9O14815 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPN9O14815 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN9O14815 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN9O14815 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms