Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CHD1O14646 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 PON3-205ENST00000451904 1053 ntTSL 3 BASIC29.25■■■□□ 2.27
CHD1O14646 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC29.25■■■□□ 2.27
CHD1O14646 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC29.25■■■□□ 2.27
CHD1O14646 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 OR8S1-201ENST00000310194 1080 ntBASIC29.25■■■□□ 2.27
CHD1O14646 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC29.25■■■□□ 2.27
CHD1O14646 KLF4P1-201ENST00000412782 1185 ntBASIC29.25■■■□□ 2.27
CHD1O14646 AC067863.1-201ENST00000494933 530 ntBASIC29.25■■■□□ 2.27
CHD1O14646 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC29.25■■■□□ 2.27
CHD1O14646 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC29.25■■■□□ 2.27
CHD1O14646 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD1O14646 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
CHD1O14646 BSG-215ENST00000618006 1329 ntTSL 2 BASIC29.25■■■□□ 2.27
CHD1O14646 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHD1O14646 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHD1O14646 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
CHD1O14646 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
CHD1O14646 AC025678.2-201ENST00000562061 970 ntBASIC29.24■■■□□ 2.27
CHD1O14646 CECR7-204ENST00000609932 568 ntTSL 2 BASIC29.24■■■□□ 2.27
CHD1O14646 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD1O14646 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD1O14646 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHD1O14646 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 CD9-202ENST00000382515 1229 ntTSL 5 BASIC29.23■■■□□ 2.27
CHD1O14646 AL627223.1-201ENST00000416693 442 ntBASIC29.23■■■□□ 2.27
CHD1O14646 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC29.23■■■□□ 2.27
CHD1O14646 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 KRT8P47-201ENST00000604727 1398 ntBASIC29.23■■■□□ 2.27
CHD1O14646 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
CHD1O14646 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD1O14646 AC122714.2-201ENST00000502787 707 ntBASIC29.23■■■□□ 2.27
CHD1O14646 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC29.23■■■□□ 2.27
CHD1O14646 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC29.23■■■□□ 2.27
CHD1O14646 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC29.23■■■□□ 2.27
CHD1O14646 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC29.23■■■□□ 2.27
CHD1O14646 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC29.22■■■□□ 2.27
CHD1O14646 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHD1O14646 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
CHD1O14646 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHD1O14646 EDF1-203ENST00000371649 790 ntTSL 2 BASIC29.22■■■□□ 2.27
CHD1O14646 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC29.22■■■□□ 2.27
CHD1O14646 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
CHD1O14646 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHD1O14646 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
CHD1O14646 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHD1O14646 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHD1O14646 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD1O14646 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC29.21■■■□□ 2.27
CHD1O14646 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC29.21■■■□□ 2.27
CHD1O14646 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC29.21■■■□□ 2.27
CHD1O14646 DUX4L27-201ENST00000554796 1261 ntBASIC29.21■■■□□ 2.27
CHD1O14646 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 ADK-206ENST00000541550 2222 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD1O14646 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC29.21■■■□□ 2.27
CHD1O14646 AC141586.3-201ENST00000562166 1838 ntBASIC29.21■■■□□ 2.27
CHD1O14646 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC29.21■■■□□ 2.27
CHD1O14646 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CHD1O14646 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
CHD1O14646 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHD1O14646 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHD1O14646 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC29.2■■■□□ 2.26
CHD1O14646 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
CHD1O14646 TERF1P3-201ENST00000505638 1227 ntBASIC29.2■■■□□ 2.26
CHD1O14646 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC29.2■■■□□ 2.26
CHD1O14646 AC051619.7-201ENST00000568314 623 ntBASIC29.2■■■□□ 2.26
CHD1O14646 AL353135.1-201ENST00000606729 504 ntBASIC29.2■■■□□ 2.26
CHD1O14646 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHD1O14646 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC29.2■■■□□ 2.26
CHD1O14646 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD1O14646 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CHD1O14646 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD1O14646 LINC01126-201ENST00000623515 1646 ntBASIC29.19■■■□□ 2.26
CHD1O14646 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC29.19■■■□□ 2.26
CHD1O14646 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC29.19■■■□□ 2.26
CHD1O14646 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms