Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 LINC01126-201ENST00000623515 1646 ntBASIC17.46■□□□□ 0.39
CDX4O14627 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.45■□□□□ 0.38
CDX4O14627 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
CDX4O14627 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.45■□□□□ 0.38
CDX4O14627 AC007967.3-201ENST00000434308 558 ntBASIC17.45■□□□□ 0.38
CDX4O14627 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.45■□□□□ 0.38
CDX4O14627 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.45■□□□□ 0.38
CDX4O14627 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDX4O14627 AC106028.4-201ENST00000614509 607 ntBASIC17.45■□□□□ 0.38
CDX4O14627 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
CDX4O14627 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.45■□□□□ 0.38
CDX4O14627 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDX4O14627 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDX4O14627 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.44■□□□□ 0.38
CDX4O14627 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.44■□□□□ 0.38
CDX4O14627 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.44■□□□□ 0.38
CDX4O14627 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.44■□□□□ 0.38
CDX4O14627 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.44■□□□□ 0.38
CDX4O14627 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX4O14627 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CDX4O14627 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.43■□□□□ 0.38
CDX4O14627 CRYGEP-201ENST00000412192 528 ntBASIC17.43■□□□□ 0.38
CDX4O14627 MKNK2P1-201ENST00000437526 628 ntBASIC17.43■□□□□ 0.38
CDX4O14627 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 AC011467.4-201ENST00000594891 528 ntBASIC17.43■□□□□ 0.38
CDX4O14627 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.43■□□□□ 0.38
CDX4O14627 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDX4O14627 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDX4O14627 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDX4O14627 ELL2P1-201ENST00000413990 1906 ntBASIC17.43■□□□□ 0.38
CDX4O14627 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX4O14627 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX4O14627 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX4O14627 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms