Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.37■□□□□ 0.37
RTCAO00442 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.37■□□□□ 0.37
RTCAO00442 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.37■□□□□ 0.37
RTCAO00442 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 RNF152P1-201ENST00000397754 604 ntBASIC17.37■□□□□ 0.37
RTCAO00442 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 TMPOP1-202ENST00000424642 1267 ntBASIC17.37■□□□□ 0.37
RTCAO00442 TSPY5P-201ENST00000426936 936 ntBASIC17.37■□□□□ 0.37
RTCAO00442 AL359075.1-203ENST00000462729 1002 ntBASIC17.37■□□□□ 0.37
RTCAO00442 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.37■□□□□ 0.37
RTCAO00442 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.37■□□□□ 0.37
RTCAO00442 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.37■□□□□ 0.37
RTCAO00442 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
RTCAO00442 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTCAO00442 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.36■□□□□ 0.37
RTCAO00442 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RTCAO00442 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 PVRIG2P-201ENST00000435460 978 ntBASIC17.36■□□□□ 0.37
RTCAO00442 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.36■□□□□ 0.37
RTCAO00442 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.36■□□□□ 0.37
RTCAO00442 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.36■□□□□ 0.37
RTCAO00442 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RTCAO00442 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTCAO00442 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RTCAO00442 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RTCAO00442 AC092597.1-201ENST00000487352 616 ntBASIC17.35■□□□□ 0.37
RTCAO00442 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.35■□□□□ 0.37
RTCAO00442 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RTCAO00442 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTCAO00442 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTCAO00442 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTCAO00442 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.35■□□□□ 0.37
RTCAO00442 AC090340.1-201ENST00000620778 4980 ntBASIC17.35■□□□□ 0.37
RTCAO00442 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RTCAO00442 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.34■□□□□ 0.37
RTCAO00442 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms