Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 GPR32P1-201ENST00000601788 811 ntBASIC14.35□□□□□ -0.11
LINC01548A6NM66 AL390719.2-201ENST00000606993 987 ntBASIC14.35□□□□□ -0.11
LINC01548A6NM66 AC093677.2-201ENST00000600169 1863 ntBASIC14.35□□□□□ -0.11
LINC01548A6NM66 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AL353692.3-201ENST00000407031 1396 ntBASIC14.34□□□□□ -0.11
LINC01548A6NM66 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 BX276092.5-203ENST00000456199 560 ntBASIC14.34□□□□□ -0.11
LINC01548A6NM66 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01548A6NM66 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01548A6NM66 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC01548A6NM66 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LINC01548A6NM66 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01548A6NM66 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01548A6NM66 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LINC01548A6NM66 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 KRT89P-201ENST00000620027 1478 ntBASIC14.33□□□□□ -0.12
LINC01548A6NM66 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 KRT8P26-201ENST00000534154 1276 ntBASIC14.33□□□□□ -0.12
LINC01548A6NM66 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms