Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 AC005336.2-201ENST00000593183 939 ntBASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 AC009533.2-201ENST00000543664 586 ntBASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TBC1D3BA6NDS4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 TP73-AS1-207ENST00000624167 988 ntBASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 ANO7L1-203ENST00000602586 1720 ntBASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3BA6NDS4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 AC008608.2-201ENST00000606089 416 ntBASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms