Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 AC080080.1-201ENST00000625121 2420 ntBASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DUXBA0A1W2PPF3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AP001094.4-201ENST00000579008 2176 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 KRT17P3-201ENST00000420566 1262 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 UNC93B5-201ENST00000530315 699 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AL353708.3-201ENST00000610272 989 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 SDHAP2-201ENST00000455183 2001 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AC099398.1-201ENST00000567919 2776 ntBASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DUXBA0A1W2PPF3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 AC133963.1-201ENST00000504166 1679 ntBASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 KSR1P1-201ENST00000446298 240 ntBASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 AL163051.1-201ENST00000569214 1512 ntBASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
DUXBA0A1W2PPF3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUXBA0A1W2PPF3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUXBA0A1W2PPF3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUXBA0A1W2PPF3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUXBA0A1W2PPF3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUXBA0A1W2PPF3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms