Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC140113.3-201ENST00000605663 199 ntBASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RASA4DP-201ENST00000460726 1199 ntBASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 YBX1P2-201ENST00000489612 999 ntBASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 BX664615.1-201ENST00000443558 458 ntBASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC006011.2-201ENST00000621313 1158 ntBASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.06■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms