Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SIGLEC16-201ENST00000599858 1437 ntBASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 FAM220CP-201ENST00000395253 831 ntBASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 AC005104.2-201ENST00000427818 678 ntBASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 AC116562.4-201ENST00000641316 2276 ntBASIC19.86■□□□□ 0.77
SCN10AQ9Y5Y9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 UPF3AP3-201ENST00000420996 769 ntBASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 PMPCAP1-201ENST00000508114 1576 ntBASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 AC093010.1-201ENST00000473625 1624 ntBASIC19.85■□□□□ 0.77
SCN10AQ9Y5Y9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 RPSAP43-201ENST00000402237 625 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 AC004832.2-201ENST00000426397 482 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 AC092183.1-201ENST00000469884 875 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 AP002414.3-201ENST00000589352 1468 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 MIR940-201ENST00000401276 94 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 AC105339.3-201ENST00000560043 636 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 GMCL1P1-201ENST00000463439 1581 ntBASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN10AQ9Y5Y9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 AC007967.2-201ENST00000432613 625 ntBASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 UNC93B6-202ENST00000528242 690 ntBASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.83■□□□□ 0.77
SCN10AQ9Y5Y9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 AC073592.4-201ENST00000623827 446 ntBASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SCN10AQ9Y5Y9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 AC097374.2-201ENST00000618617 1306 ntBASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms