Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 AC128676.1-201ENST00000454392 318 ntBASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 UNC93B4-201ENST00000505679 747 ntBASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 AL096828.2-201ENST00000567259 1965 ntBASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB1Q9Y5G3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AL357033.4-201ENST00000617703 1807 ntBASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AC046158.3-201ENST00000624947 2558 ntBASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 KRT8P41-201ENST00000533985 1514 ntBASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB1Q9Y5G3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 NBPF21P-201ENST00000425093 1451 ntBASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms