Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 AP002414.4-201ENST00000589764 1148 ntBASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 IFNL4P1-201ENST00000607083 540 ntBASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB9Q9Y5E1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 AC090164.3-201ENST00000610780 2143 ntBASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 AC009113.1-201ENST00000570267 2443 ntBASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms