Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC24.81■■□□□ 1.56
NINLQ9Y2I6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.81■■□□□ 1.56
NINLQ9Y2I6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
NINLQ9Y2I6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.81■■□□□ 1.56
NINLQ9Y2I6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
NINLQ9Y2I6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 PMS2P1-201ENST00000431037 1228 ntBASIC24.8■■□□□ 1.56
NINLQ9Y2I6 HMGN1P19-201ENST00000436976 333 ntBASIC24.8■■□□□ 1.56
NINLQ9Y2I6 SLC25A6P4-201ENST00000586535 553 ntBASIC24.8■■□□□ 1.56
NINLQ9Y2I6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC24.8■■□□□ 1.56
NINLQ9Y2I6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 INTS4P1-201ENST00000438455 1935 ntBASIC24.79■■□□□ 1.56
NINLQ9Y2I6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 MIR5100-201ENST00000579544 119 ntBASIC24.79■■□□□ 1.56
NINLQ9Y2I6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NINLQ9Y2I6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 AL020996.1-203ENST00000536896 2307 ntBASIC24.78■■□□□ 1.56
NINLQ9Y2I6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 AL591684.3-201ENST00000605187 298 ntBASIC24.78■■□□□ 1.56
NINLQ9Y2I6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NINLQ9Y2I6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 RBM17P3-201ENST00000417687 1192 ntBASIC24.77■■□□□ 1.56
NINLQ9Y2I6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NINLQ9Y2I6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms