Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC093010.1-201ENST00000473625 1624 ntBASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 KRT18P38-201ENST00000449496 1282 ntBASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 AL359075.1-203ENST00000462729 1002 ntBASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 AL136038.4-201ENST00000603606 1261 ntBASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4E1Q9UPM8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
AP4E1Q9UPM8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP4E1Q9UPM8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP4E1Q9UPM8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP4E1Q9UPM8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.89■□□□□ 0.62
AP4E1Q9UPM8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 AL391807.1-203ENST00000604392 2365 ntBASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 AC138028.4-201ENST00000564984 1845 ntBASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 BCL2-203ENST00000589955 5011 ntBASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 TMPOP1-202ENST00000424642 1267 ntBASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 HOMER2P1-201ENST00000455653 964 ntBASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AP4E1Q9UPM8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 AC092647.4-201ENST00000457211 535 ntBASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 AC008687.5-201ENST00000593746 558 ntBASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms