Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 NUS1P1-201ENST00000446295 882 ntBASIC19.2■□□□□ 0.66
CDH9Q9ULB4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 AC104819.1-201ENST00000504587 486 ntBASIC19.2■□□□□ 0.66
CDH9Q9ULB4 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
CDH9Q9ULB4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH9Q9ULB4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 AC093010.1-201ENST00000473625 1624 ntBASIC19.19■□□□□ 0.66
CDH9Q9ULB4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 KRT17P6-201ENST00000453795 1220 ntBASIC19.19■□□□□ 0.66
CDH9Q9ULB4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 KRT126P-201ENST00000549467 1181 ntBASIC19.19■□□□□ 0.66
CDH9Q9ULB4 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 AC012313.10-201ENST00000623509 926 ntBASIC19.19■□□□□ 0.66
CDH9Q9ULB4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDH9Q9ULB4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 MTCL1P1-201ENST00000446207 792 ntBASIC19.18■□□□□ 0.66
CDH9Q9ULB4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 AC074051.2-201ENST00000565115 352 ntBASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH9Q9ULB4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AC132938.6-201ENST00000623828 1655 ntBASIC19.17■□□□□ 0.66
CDH9Q9ULB4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms