Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 AC018470.1-201ENST00000624790 3129 ntBASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 AC093677.2-201ENST00000600169 1863 ntBASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 AL645929.1-201ENST00000420084 975 ntBASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF3C4Q9UKN8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF3C4Q9UKN8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 PVRIG2P-201ENST00000435460 978 ntBASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 AL163051.1-201ENST00000569214 1512 ntBASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF3C4Q9UKN8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF3C4Q9UKN8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms