Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 AP003071.4-201ENST00000562276 1284 ntBASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 AC009065.1-201ENST00000564055 1225 ntBASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 KRT8P50-201ENST00000562022 1438 ntBASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNIP1Q9NZI2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 MIR4785-201ENST00000585005 73 ntBASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 AL133373.2-201ENST00000623187 2828 ntBASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 KRT8P7-201ENST00000533003 1432 ntBASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KCNIP1Q9NZI2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC036111.1-201ENST00000533973 1582 ntBASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC138028.4-201ENST00000564984 1845 ntBASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 ESPNP-201ENST00000270691 2015 ntBASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNIP1Q9NZI2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms