Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 AC097488.1-201ENST00000507834 756 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 NUDT16P1-203ENST00000513809 620 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 AL359736.2-201ENST00000621992 437 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 AC036111.1-201ENST00000533973 1582 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 AC141586.5-201ENST00000624546 2050 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 AC099398.1-201ENST00000567919 2776 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 SDHAP2-201ENST00000455183 2001 ntBASIC19■□□□□ 0.63
HOMER3Q9NSC5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19■□□□□ 0.63
HOMER3Q9NSC5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOMER3Q9NSC5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 AC012313.1-201ENST00000593393 3059 ntBASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOMER3Q9NSC5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 AC009065.1-201ENST00000564055 1225 ntBASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 AP001412.1-201ENST00000608405 714 ntBASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 TNRC18P3-201ENST00000441896 2691 ntBASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOMER3Q9NSC5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms