Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 NEK4P2-201ENST00000580004 1012 ntBASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CHRAC1Q9NRG0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 ECEL1P3-201ENST00000427961 737 ntBASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 AC145285.6-201ENST00000604632 637 ntBASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 AC093010.1-201ENST00000473625 1624 ntBASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRAC1Q9NRG0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRAC1Q9NRG0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CHRAC1Q9NRG0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRAC1Q9NRG0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms