Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPNE5Q9HCH3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE5Q9HCH3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE5Q9HCH3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE5Q9HCH3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 AL391807.1-203ENST00000604392 2365 ntBASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 LINC00167-201ENST00000530583 1419 ntBASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 MIR662-201ENST00000384847 95 ntBASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 SEC1P-202ENST00000473944 940 ntBASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE5Q9HCH3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE5Q9HCH3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 MIR574-201ENST00000385209 96 ntBASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 AC020763.4-201ENST00000623414 4170 ntBASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE5Q9HCH3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 AC104581.1-202ENST00000635932 2618 ntBASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 CROCCP3-202ENST00000420820 1947 ntBASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 AC099336.1-202ENST00000602961 463 ntBASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE5Q9HCH3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms