Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 AC092597.1-201ENST00000487352 616 ntBASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 KRT18P31-201ENST00000506277 1292 ntBASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 POLD2P1-201ENST00000511220 997 ntBASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 SLC25A1P1-201ENST00000528351 927 ntBASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCAF1Q9H7N4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 IL9RP2-201ENST00000423948 1312 ntBASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 AC132872.1-201ENST00000566986 1195 ntBASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 AL034417.3-201ENST00000641100 1043 ntBASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
SCAF1Q9H7N4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 BX842568.4-201ENST00000421222 227 ntBASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 KRT18P58-201ENST00000527480 1120 ntBASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 AL365223.1-201ENST00000574864 1297 ntBASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 AL691403.2-201ENST00000618460 490 ntBASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
SCAF1Q9H7N4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 AIRN-201ENST00000601203 4374 ntBASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCAF1Q9H7N4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms