Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
PIF1Q9H611 CROCCP1-201ENST00000426910 5675 ntBASIC17.43■□□□□ 0.38
PIF1Q9H611 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.43■□□□□ 0.38
PIF1Q9H611 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
PIF1Q9H611 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.42■□□□□ 0.38
PIF1Q9H611 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.42■□□□□ 0.38
PIF1Q9H611 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
PIF1Q9H611 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PIF1Q9H611 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PIF1Q9H611 AC004951.3-201ENST00000418645 1148 ntBASIC17.42■□□□□ 0.38
PIF1Q9H611 NIFKP9-201ENST00000419265 221 ntBASIC17.42■□□□□ 0.38
PIF1Q9H611 AP002982.1-201ENST00000492365 877 ntBASIC17.42■□□□□ 0.38
PIF1Q9H611 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.42■□□□□ 0.38
PIF1Q9H611 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.42■□□□□ 0.38
PIF1Q9H611 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.42■□□□□ 0.38
PIF1Q9H611 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.42■□□□□ 0.38
PIF1Q9H611 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.42■□□□□ 0.38
PIF1Q9H611 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.42■□□□□ 0.38
PIF1Q9H611 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PIF1Q9H611 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.42■□□□□ 0.38
PIF1Q9H611 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PIF1Q9H611 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
PIF1Q9H611 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PIF1Q9H611 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PIF1Q9H611 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
PIF1Q9H611 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.41■□□□□ 0.38
PIF1Q9H611 AC008040.2-201ENST00000461049 708 ntBASIC17.41■□□□□ 0.38
PIF1Q9H611 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 RPPH1-201ENST00000516869 333 ntBASIC17.41■□□□□ 0.38
PIF1Q9H611 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 TMEM191A-211ENST00000637163 1067 ntBASIC17.41■□□□□ 0.38
PIF1Q9H611 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 AC009053.2-201ENST00000563701 2365 ntBASIC17.41■□□□□ 0.38
PIF1Q9H611 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PIF1Q9H611 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PIF1Q9H611 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PIF1Q9H611 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PIF1Q9H611 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PIF1Q9H611 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PIF1Q9H611 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms