Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 AL031133.1-201ENST00000406807 723 ntBASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM60Q9H2L4 AP000997.3-201ENST00000623333 2250 ntBASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM60Q9H2L4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM60Q9H2L4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 ZNF444P1-201ENST00000559497 298 ntBASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 RNF126P1-202ENST00000569893 925 ntBASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 LINC00602-201ENST00000629776 2065 ntBASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 AL133373.2-201ENST00000623187 2828 ntBASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM60Q9H2L4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 AC138028.4-201ENST00000564984 1845 ntBASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 LINC01238-205ENST00000567549 1107 ntBASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms