Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 MIR564-202ENST00000385049 94 ntBASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD4Q9H0A8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 RN7SL471P-201ENST00000580476 299 ntBASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD4Q9H0A8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 AC130371.2-201ENST00000619443 611 ntBASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD4Q9H0A8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms