Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 MESTP1-201ENST00000404287 994 ntBASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM207BP-201ENST00000447172 505 ntBASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AP002982.1-201ENST00000492365 877 ntBASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
KRTAP3-1Q9BYR8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AC036111.1-201ENST00000533973 1582 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 ANKRD19P-201ENST00000338192 862 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 B3GAT3P1-201ENST00000471720 806 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 RN7SL471P-201ENST00000580476 299 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AL136370.1-201ENST00000608166 691 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CR392000.1-201ENST00000624770 1228 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AL031985.4-201ENST00000642138 673 ntBASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms