Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.71■□□□□ 0.91
ARID3AQ99856 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.71■□□□□ 0.91
ARID3AQ99856 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
ARID3AQ99856 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.71■□□□□ 0.91
ARID3AQ99856 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 NIFKP9-201ENST00000419265 221 ntBASIC20.71■□□□□ 0.91
ARID3AQ99856 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.71■□□□□ 0.91
ARID3AQ99856 RPS2P4-201ENST00000476944 856 ntBASIC20.71■□□□□ 0.91
ARID3AQ99856 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 RARRES2P10-201ENST00000564312 460 ntBASIC20.71■□□□□ 0.91
ARID3AQ99856 AF186192.3-201ENST00000583427 947 ntBASIC20.71■□□□□ 0.91
ARID3AQ99856 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.71■□□□□ 0.91
ARID3AQ99856 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.71■□□□□ 0.91
ARID3AQ99856 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.71■□□□□ 0.91
ARID3AQ99856 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 AL161938.1-201ENST00000569833 2180 ntBASIC20.7■□□□□ 0.91
ARID3AQ99856 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ARID3AQ99856 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ARID3AQ99856 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
ARID3AQ99856 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ARID3AQ99856 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 PCDH8P1-201ENST00000428983 2773 ntBASIC20.7■□□□□ 0.9
ARID3AQ99856 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.7■□□□□ 0.9
ARID3AQ99856 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.7■□□□□ 0.9
ARID3AQ99856 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ARID3AQ99856 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
ARID3AQ99856 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARID3AQ99856 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.69■□□□□ 0.9
ARID3AQ99856 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 UBE2SP1-201ENST00000450587 669 ntBASIC20.69■□□□□ 0.9
ARID3AQ99856 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.69■□□□□ 0.9
ARID3AQ99856 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.69■□□□□ 0.9
ARID3AQ99856 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ARID3AQ99856 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ARID3AQ99856 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.69■□□□□ 0.9
ARID3AQ99856 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.69■□□□□ 0.9
ARID3AQ99856 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.69■□□□□ 0.9
ARID3AQ99856 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARID3AQ99856 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.69■□□□□ 0.9
ARID3AQ99856 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
ARID3AQ99856 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.68■□□□□ 0.9
ARID3AQ99856 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms