Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE1Q99829 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
CPNE1Q99829 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 AC006116.8-202ENST00000587620 1550 ntBASIC18.23■□□□□ 0.51
CPNE1Q99829 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE1Q99829 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.23■□□□□ 0.51
CPNE1Q99829 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 BX088651.1-201ENST00000540551 451 ntBASIC18.23■□□□□ 0.51
CPNE1Q99829 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.23■□□□□ 0.51
CPNE1Q99829 AC104390.1-201ENST00000555663 520 ntBASIC18.23■□□□□ 0.51
CPNE1Q99829 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.23■□□□□ 0.51
CPNE1Q99829 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE1Q99829 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE1Q99829 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.22■□□□□ 0.51
CPNE1Q99829 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CPNE1Q99829 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CPNE1Q99829 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE1Q99829 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE1Q99829 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.22■□□□□ 0.51
CPNE1Q99829 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE1Q99829 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE1Q99829 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 AC112497.1-201ENST00000624824 639 ntBASIC18.22■□□□□ 0.51
CPNE1Q99829 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE1Q99829 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE1Q99829 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE1Q99829 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE1Q99829 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE1Q99829 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE1Q99829 AC012317.2-201ENST00000623305 2251 ntBASIC18.21■□□□□ 0.51
CPNE1Q99829 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE1Q99829 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 AL024508.2-201ENST00000607749 1894 ntBASIC18.21■□□□□ 0.51
CPNE1Q99829 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE1Q99829 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CPNE1Q99829 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.21■□□□□ 0.51
CPNE1Q99829 FITM1-202ENST00000559294 800 ntBASIC18.21■□□□□ 0.51
CPNE1Q99829 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE1Q99829 AC116562.4-202ENST00000641738 218 ntBASIC18.21■□□□□ 0.51
CPNE1Q99829 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CPNE1Q99829 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE1Q99829 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE1Q99829 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE1Q99829 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE1Q99829 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE1Q99829 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.2■□□□□ 0.5
CPNE1Q99829 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE1Q99829 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.2■□□□□ 0.5
CPNE1Q99829 MIR4785-201ENST00000585005 73 ntBASIC18.2■□□□□ 0.5
CPNE1Q99829 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE1Q99829 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CPNE1Q99829 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE1Q99829 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms