Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 HCG4P8-203ENST00000443049 980 ntBASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 NPAP1P7-201ENST00000613027 823 ntBASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 IGHV3-41-201ENST00000613121 348 ntBASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBE2E2Q96LR5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 AC092329.2-201ENST00000598402 547 ntBASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 AC004263.2-201ENST00000617183 678 ntBASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 KRT18P1-202ENST00000452408 1331 ntBASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2E2Q96LR5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2E2Q96LR5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2E2Q96LR5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2E2Q96LR5 AC099343.3-201ENST00000605834 2503 ntBASIC14.08□□□□□ -0.15
UBE2E2Q96LR5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
UBE2E2Q96LR5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 DRAXINP1-201ENST00000437611 948 ntBASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 AC005082.1-201ENST00000413042 2259 ntBASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2E2Q96LR5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms