Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 GNAS-203ENST00000306120 1878 ntBASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 AL163051.1-201ENST00000569214 1512 ntBASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 UNC93B2-201ENST00000285383 730 ntBASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 MIR718-201ENST00000390190 70 ntBASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 CCR12P-201ENST00000446203 998 ntBASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC34Q96HJ3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 AC020916.1-201ENST00000587762 1774 ntBASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 AC036111.1-201ENST00000533973 1582 ntBASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC34Q96HJ3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AC098590.1-201ENST00000468126 897 ntBASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC34Q96HJ3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC34Q96HJ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms