Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 RBM17P1-201ENST00000453646 1190 ntBASIC18.41■□□□□ 0.54
LRRC39Q96DD0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 DUTP2-201ENST00000519164 463 ntBASIC18.41■□□□□ 0.54
LRRC39Q96DD0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 AC116562.4-202ENST00000641738 218 ntBASIC18.41■□□□□ 0.54
LRRC39Q96DD0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC39Q96DD0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 FITM1-202ENST00000559294 800 ntBASIC18.4■□□□□ 0.54
LRRC39Q96DD0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 AC010653.2-201ENST00000623505 997 ntBASIC18.4■□□□□ 0.54
LRRC39Q96DD0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 AC012317.2-201ENST00000623305 2251 ntBASIC18.4■□□□□ 0.54
LRRC39Q96DD0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRRC39Q96DD0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC39Q96DD0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.39■□□□□ 0.53
LRRC39Q96DD0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 Z99916.2-201ENST00000604037 246 ntBASIC18.39■□□□□ 0.53
LRRC39Q96DD0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC39Q96DD0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 AC007663.1-201ENST00000438948 1240 ntBASIC18.38■□□□□ 0.53
LRRC39Q96DD0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.38■□□□□ 0.53
LRRC39Q96DD0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRC39Q96DD0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 460.8 ms