Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A3Q93084 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A3Q93084 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
ATP2A3Q93084 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A3Q93084 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A3Q93084 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 AC034236.2-201ENST00000606662 1610 ntBASIC19.18■□□□□ 0.66
ATP2A3Q93084 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A3Q93084 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A3Q93084 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 TSPY22P-201ENST00000427496 604 ntBASIC19.17■□□□□ 0.66
ATP2A3Q93084 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 CHCHD2P8-201ENST00000429873 447 ntBASIC19.17■□□□□ 0.66
ATP2A3Q93084 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A3Q93084 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A3Q93084 AL031598.1-201ENST00000561511 1773 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms