Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 LINC01126-201ENST00000623515 1646 ntBASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 AC093503.3-201ENST00000624917 2352 ntBASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 IGHV3-47-201ENST00000425060 335 ntBASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 VENTXP7-201ENST00000475503 772 ntBASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 AL160237.2-201ENST00000556165 472 ntBASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A1Q93050 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
ATP6V0A1Q93050 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATP6V0A1Q93050 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ATP6V0A1Q93050 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms