Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 AC005829.1-201ENST00000570002 483 ntBASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 AL139288.1-201ENST00000623748 933 ntBASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 Z98044.1-201ENST00000632503 1764 ntBASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 BX323043.1-201ENST00000641006 1765 ntBASIC20.57■□□□□ 0.88
SH3TC2Q8TF17 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 MIR4469-201ENST00000583919 79 ntBASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 AC064836.3-201ENST00000607928 673 ntBASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 AC106028.4-201ENST00000614509 607 ntBASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 TCF3P1-201ENST00000423021 1937 ntBASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3TC2Q8TF17 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 AL645939.2-201ENST00000427340 991 ntBASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3TC2Q8TF17 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 FEM1AP3-201ENST00000403722 1741 ntBASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 ALG1L5P-201ENST00000482043 771 ntBASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SH3TC2Q8TF17 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms