Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.08■■□□□ 1.12
SNED1Q8TER0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.08■■□□□ 1.12
SNED1Q8TER0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.08■■□□□ 1.12
SNED1Q8TER0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 AC002347.1-201ENST00000569543 541 ntBASIC22.07■■□□□ 1.12
SNED1Q8TER0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 AC079776.2-201ENST00000641154 1609 ntBASIC22.07■■□□□ 1.12
SNED1Q8TER0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.07■■□□□ 1.12
SNED1Q8TER0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNED1Q8TER0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 RNA5SP416-201ENST00000516838 111 ntBASIC22.06■■□□□ 1.12
SNED1Q8TER0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNED1Q8TER0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.06■■□□□ 1.12
SNED1Q8TER0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.05■■□□□ 1.12
SNED1Q8TER0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.05■■□□□ 1.12
SNED1Q8TER0 YBX1P5-201ENST00000509441 847 ntBASIC22.05■■□□□ 1.12
SNED1Q8TER0 AC112698.1-201ENST00000510299 916 ntBASIC22.05■■□□□ 1.12
SNED1Q8TER0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.05■■□□□ 1.12
SNED1Q8TER0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.05■■□□□ 1.12
SNED1Q8TER0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNED1Q8TER0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 RPS8P6-201ENST00000426177 609 ntBASIC22.04■■□□□ 1.12
SNED1Q8TER0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNED1Q8TER0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.04■■□□□ 1.12
SNED1Q8TER0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNED1Q8TER0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.03■■□□□ 1.12
SNED1Q8TER0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNED1Q8TER0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNED1Q8TER0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNED1Q8TER0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.03■■□□□ 1.12
SNED1Q8TER0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNED1Q8TER0 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.03■■□□□ 1.12
SNED1Q8TER0 AC007967.3-201ENST00000434308 558 ntBASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms